COURSE CATALOG
2021-2022 Spring Semester
Online
International College of UCAS
目录
International College of UCAS. 1
Plant Physiology and Ecology. 11
Molecular Entomology and Plant Pathology. 14
Introduction to Epigenetics and RNA silencing. 26
Nanobiological Sensing and Detection. 30
Nanotechnology for Solar Energy Utilization Applications. 32
Plate Tectonics and Evolution of Tibetan Plateau. 35
Chemical Reaction Engineering. 48
Energy Chemistry and Energy Chemical Industry. 51
Green Chemistry and Engineering. 52
Fluidization and Multiphase Flow.. 54
Applications of Remote Sensing on Climate Change, Land Science and Severe Weather. 57
Expected level of proficiency from students entering the course: 60
Fundamental for Internet of Things and Its Applications. 63
Integrative Systematic Biology. 74
General Introduction
- Course Selection System-for Professional Courses Only
This course selection system is for students registering courses online. Because the capacity of every course is limited and first come first select, this system will be opened during Jan. 10th –Jan. 31st, 2022 and the students from International College can register first. Please use the google chrome or 360 browsers. Do not choose two courses schedule overlap.
Website: http://ic-course.ucas.ac.cn/
Username: Your passport ID
Original password: 123456
Date | Process |
Jan. 11-Jan. 31 | Register professional courses in Course Selection System |
Feb.28 | Courses start |
Feb.28-Mar.11 | Confirm the registration with assistant teacher of each course |
Jul. 1 | All the courses end |
NOTE: The course selection system is just for collecting students’ information. It is just the first step. Only after confirming with the teaching assistant can the course be selected successfully.
- General Degree Requirements for Doctors
The requirement of UCAS for Doctor Degree is to get at least 9 credits before graduation. 4 credits should be from Professional Degree Courses. But students from institutes need to check out the requirements of your own institutes. Each institute has different requirement of credits. Please contact the Educational Administration of your own institutes first.
- General Degree Requirements for Masters
The requirement of UCAS for Masters is to get at least 30 credits before graduation. At least 13 credits should be from Professional Degree Courses. Every master student needs to take at least 2 credits from optional courses.
- General Degree Requirements for MD-PhD Students
The requirement of UCAS for MD-PhD students is to get at least 38 credits before graduation. 12 credits are from the Public Compulsory courses. At least 16 credits should be from Professional Degree Courses. Every student needs to take at least 2 credits from optional courses.
Types | Public compulsory courses | Optional courses | Professional degree courses | In total |
Masters | 7 credits | ≥2 credits | ≥12 credits | ≥30 credits |
PhD | 7 credits | None | ≥4 credits and ≥2 courses | ≥9 credits |
MD-PhD | 13 credits | ≥2 credits | ≥16 credits | ≥38 credits |
- Courses Type
Courses are classified as degree courses and non-degree courses.
5.1 Public compulsory courses (7 credits in total)—Degree Courses
(1) Elementary Chinese 1 (2 credits);
(2) Elementary Chinese 2 (2 credits);
(3) China Panorama (2 credits).
(4) Academic Morality and Writing Norms (1 credits).
These four Public compulsory courses are Degree Courses for all international students. However, we have a rule about Course Waiver. Students who can meet one of the conditions can apply for course waiver and will get 6 credits directly (except Academic Morality and Writing Norms).
A. Providing a certificate of HSK Level 3;
B. Got a bachelor’s degree or master’s degree which are taught in Chinese.
Students who apply for the course waiver need to contact Ms. Season (dingdanni@ucas.ac.cn) before the February 28th.
5.2 Professional courses—Degree Courses and Non-degree Courses
The professional courses can be classified as one of two types: Degree Courses and Non-degree Courses. This final decision of course classification for each student is left to the supervisor, as s/he is in the best position to assess the courses for the graduate programs. If students find the professional courses are totally not related to his/her major and will not help the research for PhD, then these courses can be seen as Non-degree Courses (Optional Courses). If the professional courses will help the research for PhD, then they should be Degree Courses (Compulsory Courses). This classification of one course will be shown on the course selection form and the final score sheet. All the students have two weeks to attend the professional classes and choose them.
5.3 Optional courses—Non-degree Courses
All the optional courses are non-degree courses.
- Rules about courses results
Students should drop out of the university under one of the following circumstances:
1、Master candidates who fail two degree courses within one semester and still fail one after relearning the courses, or fail three degree courses during the school years.
2、PhD candidates who fail one degree course and still fail after relearning the course, or fail two courses during their school years.
The Public compulsory courses are all Degree courses.
- Contact Information
Education Coordinator for Professional Courses:
- Phone: 010-82680563, Ms. Sophie
- E-mail: hutian@ucas.ac.cn
Education Coordinator for Public compulsory courses:
- Phone: 010-82680986, Ms. Season
- E-mail: dingdanni@ucas.ac.cn
2021-2022学年春季和夏季学期校历
年度 year | 2022 春季学期 ( Spring Semester)
| 2022夏季学期 (Summer Semester)
| ||||||||||||||||||
月份 month | 二月(Feb) | 三月(Mar) | 四月(Apr) | 五月(May) | 六月(Jun) | 六月(Jun) | 七月(Jul) | |||||||||||||
周次 week | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | I (17) | II (18) | III (19) | IV (20) |
星期一(Mon) | 21 | 28 | 7 | 14 | 21 | 28 | 4 | 11 | 18 | 25 | 2 | 9 | 16 | 23 | 30 | 6 | 13 | 20 | 27 | 4 |
星期二(Tue) | 22 | 1 | 8 | 15 | 22 | 29 | 5清明节 | 12 | 19 | 26 | 3 | 10 | 17 | 24 | 31 | 7 | 14 | 21 | 28 | 5 |
星期三(Wed) | 23 | 2 | 9 | 16 | 23 | 30 | 6 | 13 | 20 | 27 | 4 | 11 | 18 | 25 | 1 | 8 | 15 | 22 | 29 | 6 |
星期四(Thu) | 24 | 3 | 10 | 17 | 24 | 31 | 7 | 14 | 21 | 28 | 5 | 12 | 19 | 26 | 2 | 9 | 16 | 23 | 30 | 7 |
星期五(Fri) | 25 | 4 | 11 | 18 | 25 | 1 | 8 | 15 | 22 | 29 | 6 | 13 | 20 | 27 | 3端 午节 | 10 | 17 | 24 | 1 | 8 |
星期六(Sat) | 26 | 5 | 12 | 19 | 26 | 2 | 9 | 16 | 23 | 30 | 7 | 14 | 21 | 28 | 4 | 11 | 18 | 25 | 2 | 9 |
星期日(Sun) | 27 | 6 | 13 | 20 | 27 | 3 | 10 | 17 | 24 | 1劳动节 | 8 | 15 | 22 | 29 | 5 | 12 | 19 | 26 | 3 | 10 |
Course title:
Plant Physiology and Ecology
Instructor:
Associate Prof. Laiye Qu
Course type: Lecture
Course Assessment:
None
Grading Policy:
Registration (17% of the final score)
one report (50% of the final score)
one quiz (33% of the final score)
Course Prerequisites:
None
Catalog Description:
This course will introduce the plant physiological mechanisms that underlie ecological observation under the changing environment. The course will mainly introduce some general knowledge of photosynthesis, plant water relations, mineral nutrients, growth and allocation, symbiosis associations, and plant-soil interaction. Some general research methods and some basic statistical analysis and statistical plotting also will be introduced.
Schedule of the course
No. | Objectives | Remarks |
1. | General Introduction |
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2. | Plant adaption |
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3. | Photosynthesis |
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4. | Respiration |
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5. | Plant water relations |
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6. | Mineral nutrients |
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7. | Nitrogen |
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8. | Decomposition |
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9. | Phosphorus | Report |
10. | Mycorrhiza |
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11. | Multiple relationship |
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12. | Growth and allocation |
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13. | Restoration |
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14. | Succession |
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15. | Plant-soil feedback |
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16. | General discussion |
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17 | Examination | Presentation |
Course title
Nano-biology
Instructor(s)-in-charge:
Assoc. Prof. Chen Deliang & Prof. Zhang Zhuqing
Course type:
Lecture
Course Schedule:
See Schedule of the course
Course Assessment:
Each student is expected to give an oral presentation on a topic related to his/her own interest and to Nanobiology
Grading Policy:
30% assessment , 70% final exam (open book).
Course Prerequisites:
None.
Catalog Description:
Nanobiology is to understand the Biological Science in the nanometer scale. Targeting at graduate students in Biology, Chemistry, Physics and Engineering with interest in Biological Science, this course not only introduces the basic concepts, principles and techniques of Nanobiology, but also presents many of the lessons that may be learned from nature and how they are being applied to nanotechnology. Participants will be guided to discuss latest discoveries and hot topics, such as manipulating single molecules and protein design in related interdisciplinary fields.
Schedule of the course
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Textbook and any related course material
Bionanotechnology: lessons from nature; 1st edition
David S. Goodsell,
Wiley-Liss, Inc. 2004
References will be provided in class.
Course title
Molecular Entomology and Plant Pathology
Instructor(s)-in-charge:
Prof. ZOU Zhen
Prof. LI Xiang-Dong
Prof. LIU Jun
Course type:
Lecture
Course Schedule:
3hrs/week by instructor.
Tuesday afternoons, from 13:30-16:20.
Course Assessment:
Quiz, exams, and home work
Grading Policy:
Final scores will be determined by 33.3%(LI),33.4%(ZOU), and 33.3%(LIU).
Course Prerequisites:
Without
Catalog Description:
This course will cover the basis of modern agriculture biotechnology, molecular entomology and plant pathology. In the first part, we will explain the importance of insect science and its impact on agriculture, forest, and human health. We will also discuss several important aspects of molecular entomology such as systematics, metabolism, endocrinology, reproduction, locomotors system etc. The basic knowledge of insect physiology, molecular biology, and biochemistry, which were used to study entomology, will be provided during the class. The second part of the course will give students the general view of the history and development of plant pathology. Particularly, the concepts of plant innate immunity and plant epidemiology will be introduced and emphasized, including PAMPs triggered immunity, effector triggered immunity and basal defense of plants. In addition, plant pathogen isolation and identification and plant protection will be discussed in the course.
Schedule of the course
section | content | Lecturer |
1 | Introduction to entomology | Zhen Zou |
2 | DNA synthesis, transcription, and translation | Zhen Zou |
3 | Insect transgenesis and comparative genomics | Zhen Zou |
4 | Molecular Systematics and Phylogeny | Zhen Zou |
5 | Circulatory system, Endocrinology and Reproduction /First Exam | Zhen Zou |
6 | Insect Nervous Systems | Xiangdong Li |
7 | Insect Visual Signaling | Xiangdong Li |
8 | Insect Chemical Communication | Xiangdong Li |
9 | Insect Mechanical Communication I | Xiangdong Li |
10 | Insect Mechanical Communication II | Xiangdong Li |
11 | Insect Locomotor Systems /Second Exam | Xiangdong Li |
12 | Introduction to plant pathology | Jun Liu |
13 | Plant basal defense | Jun Liu |
14 | Plant innate immunity I | Jun Liu |
15 | Plant innate immunity II | Jun Liu |
16 | Plant epidemiology | Jun Liu |
17 | Disease management and plant protection/Third Exam | Jun Liu |
Total |
| 51 |
Textbook and any related course material:
Marc J. Klowden (2007) Physiological Systems in Insects. 2nd Ed. Elsevier Inc. (One annotated version permitted to publish in PRC)
George N. Agrios (2005) Plant Pathology, Fifth Edition Acadmeic Press, London, UK.
Reg Chapman (1997) The Insects Structure and Function 4th Ed. University Press, Cambridge, UK.
Lawrence I. Gilbert (2012) Insect Biochemistry and Molecular Biology. Acadmeic Press, London, UK.
Course title
Biochemistry
Instructor(s)-in-charge:
Prof. ZHONG Liangwei and Professor ZHANG zhuqing
Course type:
Lectures and project works
Course Assessment:
A written final examination and an oral presentation of a project work.
Grading Policy:
An open written final examination (60%), an oral presentation of a project work (30%) and attendance (10%).
Course Prerequisites:
A knowledge on organic chemistry.
Catalog Description:
Upon completion of the course, the students should: (1) be familiar with the basic properties and functions of amino acids and proteins, as well as the principle for protein separation, purification, identification; (2) know how to analyze enzyme activity, enzyme kinetics and protein-protein interaction; (3) understand protein synthesis, targeting and modifications; (4) understand the association of abnormal glucose, lipid and amino acid metabolism with diseases; (5) be able to explain connections among carbohydrate metabolism, lipid metabolism and amino acid metabolism; (6) be able to evaluate biochemical literatures and give an oral presentation.
Content
The course is divided into the following parts:
Introduction to Biochemistry (Professor ZHONG liangwei)
Section A – Amino acids and proteins (Professor ZHONG liangwei)
A1. Amino acids and proteins
A2. Structures and functions of proteins
A3. Purification of proteins
Section B – Enzymes (Professor ZHONG Liangwei)
B1. Properties of enzymes
B2. Factors affecting enzyme activity
B3. Enzyme kinetics and inhibition
Section C – Protein synthesis, targeting, modifications and folding (Professor ZHONG Liangwei and Associate Professor ZHANG zhuqing)
C1. Protein synthesis
C2. Protein targeting
C3. Protein modifications
C4. Protein folding and protein structure prediction (Associate Professor ZHANG zhuqing)
C5. Protein design and structure-based drug design (Associate Professor ZHANG zhuqing)
Section D – Carbohydrate metabolism (Professor ZHONG Liangwei)
D1. Basic properties of carbohydrates
D2. Metabolic pathways
D3. Digestion and absorption
D4. High glucose and oxidative stress
Section E – Lipid metabolism (Professor ZHONG Liangwei)
E1. Structure and roles of fatty acids
E2. Fatty acid breakdown and synthesis
E3. Cholesterol metabolism
E4. Lipoproteins
Section F – Nitrogen metabolism (Professor ZHONG Liangwei)
F1. Nitrogen fixation and assimilation
F2. Amino acid metabolism
F3. Urea cycle
Section G — Electron Transport and Oxidative Phosphorylation (Professor ZHONG Liangwei)
G1. The electron transport chains
G2. Oxidative phosphorylation.
Teaching methods
- The teaching includes lectures and project works.
- Project works encourage intensive reading of literatures, giving an oral presentation.
Suggested Textbook, References, and Link
- Lehninger, Principles of Biochemistry, fourth edition.
- Oxidative stress, inflammation and carcinogenesis are controlled through the pentose phosphate pathway by transaldolase, Trends Mol Med 17 (2011) 395-403.
- Regulation of cellular metabolism by protein lysine acetylation, Science 327 (2010) 1000-1004.
- Thioredoxin 1 Is Inactivated Due to Oxidation Induced by Peroxiredoxin under Oxidative Stress and Reactivated by the Glutaredoxin System, J Biol Chem. 288 (2013) 32241-32247.
- Entrez Medline: http://www.ncbi.nlm.nih.gov/pubmed/
Course title
Conservation Biology
Instructor(s)-in-charge:
Prof. JIANG Zhigang and Associate Professor LIU Xuecong
Course type:
Lecture, classroom exercise, student presentations
Course Schedule:
4 hrs/week:3 hr. lecture by instructors, one hr. Offline Reading Course. “Inverted Classroom”: Student presentation session will be held after the main course presentations.
19:00-21:50. Wednesday, offline reading section 1 hr, (Starts form the 2nd March, 2022).
Virtue Classroom:2022/03/02-2022/06/29 19:00-21:50(GMT+08:00)
Conservation Biology 2022
https://meeting.tencent.com/dm/BEIEVZTDNbgg
Tencent Meeting Room #:879-4732-7219
Course Assessment:
Homework: 3 assignments
Grading Policy:
40% reading course, 60% final exam + class attendance.
Course Prerequisites:
University level education in Biology, Biological Technology or applied biology sciences like Agricultural Science, Forestry Science, Environmental Science, Aquatic and Oceanic Sciences, Medical and Veterinary Science as well as in University level education in Education Science and Management Science.
Catalog Description:
Conservation Biology is a science of protecting biodiversity, preventing human caused species extinctions and maintaining sustainable development of human society. Conservation Biology was established in mid-1990s in the United States of America, and it has fully grown into a main stream science since its’ born. In this course, the professor will start with the lecture, The Pandora’s Box: Zoonosis and Conservation, to illustrate the emerging and reemerging of pandemic disease, particularly zoonosis- the wild animal human share disease and its impacts on human society, taking the outbreak of COVID-19 pneumonia as an example to shed lights on the new challenge in Conservation Biology. Then the instructor will give a briefly review of human civilization, followed by introducing the new concepts such as public goods, consumerism, and consumer behavior in modern society, and the professor will emphasize the needs of rethinking about the doctrines in the master piece of philosophy, Tao Te Ching, and social norms. Then the professor will talk about the history, scope and missions as well as theoretic frames and practice measures of Conservation Biology. In the following lectures, the professor will present the principles, methods and characteristics of Conservation Biology, which now is transforming into a new science—Conservation Sciences. Dr. Liu will give an introduction to experimental design and data analyses in conservation with computer practice in the classroom. Species diversity is the core of biodiversity. The professor will introduce the concept of species in evolution, the famous question in science: “How many species are there on Earth?”, plus the Tree of Life, then the professor will elaborate the speciation and extinction of species and the last effort of reviving an extinct species—the de-extinction protocol.
Global Change is important issue and it is also a disputing issue. The professor will trace the issue and talk about its impacts on conservation with examples form the Qinghai-Tibetan Plateau and the arctic. Plausible mitigation measures of the impacts of global change will be given. The professor will outline the mega biodiversity countries, biodiversity hot spots, global vs. China’s biomes. The professor will also introduce the diverse landscapes, the sharply contrasting climate types, different habitats and rich fauna and flora in the country. Dr. Liu will talk about the conservation of primates with stories of social behavior of the Sichuan snub-nosed monkey. The professor will talk about the threatened wild species and degraded natural ecosystems in the country due to intensified human activities, land-cover change, environmental pollution, growing of human population plus the influence of global change. The professor will talk the legend of giant panda as an example of flagship species and talk about the down-listing of giant panda in China’s Red List of Biodiversity in 2016, at same time introduce the IUCN Red List Criteria for Endangered Species and China’s Red List of Vertebrate, with exercise in assessing species using the IUCN Red List Criteria for Endangered Species. The professor will elaborate the biodiversity relevant international treaties like Convention on Biological Diversity (CBD), Convention on International Trade of Endangered Species of Wild Fauna and Flora (CITES), which provide the international law environment for conservation and the country ‘s endeavor in implementation its commitments. Besides to conduct basic research in classifying, inventorying and monitoring biodiversity, the scientists in country also carried out conservation researches to back up the commitments of the government to implementation of CBD and CITES, such as rescuing endangered species, reforesting the mountains and deserts, as well as protecting habitat of wild species and maintaining ecosystem functioning and services. All these be covered in the course. Therefore, while reviewing the current development of Conservation Biology in the world, the professor will give case studies of China’s endemic species; represent biomes and conservation practice to enrich the contents of course. Small population is a real problem in conservation, with practice in computer simulation, the students will understand the genetic problems in small populations. In situ and ex situ conservation are major approaches in preserving biodiversity. The professor will explain why should we carry out ex situ conservation and how to carry out it, with examples of ex situ conservation from Saudi Arabia and from China. The professor will introduce the translocation of endangered species and reintroduction of locally extinct species. The professor will introduce the protected areas (PAs) such as, natural reserves, wildlife refuge, national parks, nature parks, World Natural Heritage Sites, as well as the “Green for Grain”, “Green for Grass” projects in China as examples of in situ conservation, and will review the “Half Earth” initiative and the development and analyze the achievements and shortfalls in management of PAs.
According to the new requirement of the UCAS in 2020, the professors are required to add contents about the scientific reading to improve the reading comprehensive ability of the students of the course. Reading Skills for Students in Conservation Science will be added to the course in four lectures with three chapters in each lecture.
"Inverted Classroom". The part of the student oral presentations in the course lectures serve as "Inverted Classroom". Such a practice is a rearrangement of lectures to student presentations, shifting the power of learning to students. Each student in the course will have time to focus more on proactive project-based learning, working together to address localization or globalization challenges and other real-world issues to understand conservation. The classroom is thus inverted that requires students to work independently before the student oral presentations, to access materials in library, to read enhanced e-books, to search for reference and to discuss with other students on the Internet. The professor and Teaching Assistant will guide the student presentation and will lead corresponding discussion in the inverted classroom. The professor and Teaching Assistant will communicate with everyone in the classroom through Internet. In the Inverted Classroom, students independently worked out plan for learning and presentation of knowledge, while The professor and Teaching Assistant will adopt teaching and collaboration methods to meet the needs of students and facilitate their personalized learning and presentation. The goal of student presentation in Inverted Classroom is to let students learn more real know-how from their thesis and future career through practice.
Schedule of the course
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Contents of the course:
Lecture 1: The Pandora’s Box: Zoonosis and Conservation
- The outbreak of COVID--19 in 2019
- The diseases and zoonosis
- An example: Lyme disease (Video7:38)
- The Black Death
- The remerging and newly emerging diseases
- Who opens the Pandora Box?
- Infectious disease and wildlife populations
- MERS, SARS, COVID-19, lessons so far for conservation…
Lecture 2: History of Conservation
- Human civilization
- The biodiversity crisis
- The nascent of Conservation Biology
- Public goods, consumerism and consumer behavior
- Environment problems we confronted
- Rethink about Tao Te Ching and Social Norms
- The nascent of Conservation Biology
Lecture 3 Principles, Ideas and Methods in Conservation Science
- Mega biodiversity countries
- Biodiversity hot spots
- Physical geography of China
- Case study: Video BBC Wild China
- Vegetation: global vs. China
- Origin centers of crops in the world
- Crops, fruits and garden plants native to the far east
Lecture 4 Introduction to Experimental Design and Data Analyses in Conservation
- Experimental design in Conservation
- Descriptive statistics
- Hypothesis testing
- Introduction to SPSS
- A classroom practice
Lecture 5 Speciation, Extinction and De-Extinction
- Evolution of species concept
- The Tree of Life
- How many species are there on the Earth?
- Speciation
- Extinction of species
- The De-Extinction
Lecture 6 Global Change and its Impacts On Conservation
- Global change: what is happening now?
- The evidence and arguments
- Why the dispute?
- Impacts of global change on conservation
Lecture 7 Diversity in Agriculture and Biodiversity in China
- Mega biodiversity countries
- Biodiversity hot spots
- Physical geography of China
- Video BBC Wild China
- Vegetation: global vs. China
- Origin centers of crops in the world
- Crop and domestic animal diversity in agriculture
- Crops, fruits and garden plants native to the far east
Lecture 8: The Small Population Problem in Conservation
- The small population problem
- The Extinction Vortex
- The inbreeding
- The genetic draft
- The genetic purge
- The classroom practice Web PopGen® simulation
Lecture 9: Criteria of Endangered Species and IUCN Red lists
- Criteria of endangered species
- The Down-listing of giant panda in 2016
- The legend of giant panda
- IUCN Red List for Endangered Species
- China’s Red List for Vertebrates
Lecture 10: Status, Behavior and Conservation of Primates
- Primates of the world
- Primate societies
- Conservation status of primates in China
- Ecology of endangered golden snub-nosed monkeys
- Vocal behavior of golden snub-nosed monkeys
Lecture 11: Ex-situ Conservation
- Why ex situ conservation?
- How to carry out ex situ conservation?
- Case study: Wildlife Conservation Center in Saudi Arabic
- Reintroduction of Saiga in China
- Behavioral problems in captive bred animals
- A synthesis: Captive Breeding of Giant Panda
- Ex situ conservation of plants: Germplasm resource repository and botanical gardens
- Artificial propagation of Drebremium
Lecture 12: Protected Areas
- The definition of Protected Areas (PAs) by IUCN
- IUCN categories of PAs
- The growth of PAs in the world and in China
- The challenges in the PAs management
- The conservation migratory species: the example of Mongolian gazelle
- The Half-Earth Initiative--How much land we can set aside?
Lecture 13: Student presentation I
Lecture 14: Student presentation II
The final mark of the student will be 20% attendance and 40% the presentation of the reading exercise + 40% final exam. The final exam will be an open-class exam.
Offline Reading Skills for Students in Conservation Science
The outlines
The plan to give the Reading Skills for Students in Conservation Science in the course of Conservation Biology is introduced below. Each part of the following 8 parts will be given at the fourth lecture hour of each lecture. Students will give their presentation about literature reading choosing one of the three topics listed below. The presentations of students will be arranged into 2 lecture sections, we have slots for all students registered so far, if more students take the course, we will extend the student presentation section.
Part I General introduction
I.I Why?
- Knowledge building/Learning
- Master the skill of critical reading
- The needs of self-taught
I.II How?
- Comprehensive reading
- Intensive reading
- Critical reading
I.III What?
- Scientific literature
- Science media
- Popular science
Part II Reading through the Internet
- The Knowledge Explosion
- The Internet Revolution
- A convenient, efficient and prevalent way
- Knowledge mining from the internet
Part III Comprehensive reading
- For academic learning
- For general interests
- For leisure (time-killing)
Part IV Fast reading
- How get the main ideas of what you read?
- The abstracts and summaries
- The tables and figures
- The topic sentences
- Building your vocabulary
Part V Intensive reading
- Learning the methodology
- Master the new advances
- Discover new direction for study
Part VI Critical reading
- Learn to ask questions
- Learn to be critic
- Find out the key points from a paper or a book
Part VII Learn to review or to comment on manuscripts
- What is the aim of the manuscript?
- Is the problem worth of study?
- What is the question/working hypothesis/the goal in the study?
- How did the authors test the hypothesis or achieve the goal stated?
- What did the authors find?
- Did author(s) discuss the implication and problems associated with the study?
- Is the author(s) read the current relevant literature for the study?
Part VIII Taking notes and managing reference
- Download the reference
- Keeping taking notes
- Using a reference management tool
Part IX Summarizing and Reviewing
- Be prepared for your thesis/dissertation
- A literature review for your study topic
- The general review chapter(s) for your thesis/dissertation
Part X Learning writing from reading
- A good scientist is also a good writer
- Learn writing from reading
- Take a writing course, starting from writing a sentence …
Part XI Preparing for your future
- What career in conservation?
- What are your interests?
- Where are the information?
- Be prepared, always
Part XII Presentation of what you read
- Writing an outline
- Design your PPT
- Practice
- Be concise, confident, clear, remember the time limit is a key issue
The outlines for the presentations by student
Choosing one of the following topics, each student should give a 15-min presentation with his/her own PPTs, each give a 12-min talk + 3-min questions and comments by professors and his/her peer.
Tentative topics for student presentations:
a) My future study area
b) A hot domain/A new advance in science
c) I discovered something worth of further study in conservation/science
The key points in your presentation:
For Topic a) My future study area, you should talk about the following points:
- The back ground of the literature searching (What are current status of the field and how do you find the reference to the recent development?)
- The maintain discovery in the field (Talking about key literature in the field)
- The weakness in methodology, the knowledge gap in the field. or your plan to work on the issue in foreseeable future
For Topic b) A hot domain/A new advance in science, you should talk about the following points:
- The back ground of the literature searching (How do you find the topic?)
- The maintain discovery in the field (Talking about key literature in the field)
- The weakness in methodology, the knowledge gap in the field. or your comment of the development in the field.
For Topic c) I discovered something worth of further study in conservation/science, you should talk about the following points:
- How did you find the issue in reading?)
- The general introduction to the discovery
- Why do you think it is a hot topic? What are the likely impact on society or scientific work in foreseeable future?
Textbook and any related course material:
Gaston, K. J. 1996. Biodiversity: A Biology of Numbers and Differences. Oxford: Blackwell Science.
Hannah L.2012. Saving a Million Species: Extinction Risk from Climate Change. Washington, DC: Island Press.
Jeon Yonung-jae. 2012. Journey to the Ecosystem of the DMZ and CCL. Seoul: Korea National Park Serves, Ministry of Environment.
Jiang, Z. 2016. The deterministic effect of the CITES and nominal impacts of social norms on global wildlife trade. RE: “Collective Action: Social norms as solutions” Science 354:42-43. http://science.sciencemag.org/content/354/6308/42.e-letters.
Jiang, Z. 2016. The responsibility and readiness of young conservation scientists. E-letter to P. Gluckman. The science–policy interface. Science 353: 969. http://science.sciencemag.org/content/353/6303/969.e-letters
Jiang Z. 2002. Key Topics in Biodiversity and its Conservation, an English training book for UNDP/UNEP/GEF Biodiversity Support Program for the Northwest and East Central Asia Region.
McCord E L. 2012. The Value of Species. New Haven: Yale University Press.
Novacek, M.J. 2001. The Biodiversity Crisis. New York: The New Press.
Primack, R. B. 2010. Essentials of Conservation Biology. 5th ed. Sinauer Associates, Inc. Sunderland, USA.
Stearns, BP and Stearns SN. 1999. Watch, from the Edge of Extinction. New Haven: Yale University Press.
Wilson, E. O. 2001. The Diversity of Life. London: Penguin Books. [Twice winner of Pulitzer Price]
Video BBC Wild China
Expected level of proficiency from students entering the course:
University level education in Biology, Biological Technology or applied biology sciences like Agricultural Science, Forestry Science, Environmental Science, Aquatic and Oceanic Sciences, Medical and Vet Science as well as in University level education in Education Science and Management Science
Course title
Introduction to Epigenetics and RNA silencing
Instructor(s)-in-charge:
Prof. Xiaoming Zhang 010-64807550 zhangxm@ioz.ac.cn
Prof. Xianhui Wang 010-64807220 wangxh@ioz.ac.cn
Prof. Weiqiang Qian (Peking University)010-62768230 wqqian@pku.edu.cn
Teaching assistant:
Dr. Qi Li 010-64807550 liqi@ioz.ac.cn
Course type:
Lecture
Course Assessment:
mini-tests in each section
Grading Policy:
mini-tests scores
Course Prerequisites:
Without
Catalog Description:
Epigenetics and RNA silencing are two of the hottest topics in the past two decades. Epigenetics is the study of heritable changes in gene expression that do not change DNA sequence. RNA silencing is a general regulation mechanism in eukaryotes that regulates gene expression by 20-30 nt sRNAs in transcription or post-transcription levels. In this Epigenetics, we will introduce how DNA methylation, histone modification, chromatin remodeling, long non-coding RNAs and RNA modification regulate gene expression in eukaryotes. In the second part, we will study RNA silencing on sRNA generation, amplification, loading, action, turnover, and function. The most popular technologies used in Epigenetic studies and non-coding RNAs will also be discussed.
This course not only will provide students the basic concepts of RNA silencing and Epigenetics, but also will provide student the requisite methods in these two fields. At the same time, we will share the students a story in RNA silencing or Epigenetic fields in each class. These stories include but not limit to: Transgenic technology, Cross-kingdom RNA silencing, anti-viral function of RNA silencing, X-inactivation, Transgenerational epigenetic inheritance, Imprinting, disease, Honey bee epigenome, and flowing. After the course, the students should understand the biogenesis and function of small RNAs, lncRNAs, the difference between genetic and epigenetic regulation and how to study projects relate to Epigenetics and RNA silencing.
Schedule of the course
section | Content | Hours |
1 | Introduction to Epigenetics and RNA silencing | Class teaching 3h+After class discussion and Quiz 1h |
2 | Histone modification / X-inactivation | Class teaching 3h+After class discussion and Quiz 1h |
3 | Histone variation / Epigenetics regulation in disease | Class teaching 3h+After class discussion and Quiz 1h |
4 | Chromatin remodeling / Epigenetics in flowering | Class teaching 3h+After class discussion and Quiz 1h |
5 | DNA methylation-establishment and maintenance / Imprinting | Class teaching 3h+After class discussion and Quiz 1h |
6 | DNA demethylation / Molecular tools to study DNA methylation | Class teaching 3h+After class discussion and Quiz 1h |
7 | Transgenerational epigenetic inheritance / Honey bee epigenome | Class teaching 3h+After class discussion and Quiz 1h |
8 | sRNA processing / Genetic engineering | Class teaching 3h+After class discussion and Quiz 1h |
9 | sRNA amplification and loading / RNA silencing function in plant immunity to virus | Class teaching 3h+After class discussion and Quiz 1h |
10 | Target recognition and action of sRNAs / Popular tools to study RNAi | Class teaching 3h+After class discussion and Quiz 1h |
11 | The modification and degradation of sRNAs / Animal virus and RNA silencing | Class teaching 3h+After class discussion and Quiz 1h |
12 | The movement of RNA silencing / Cross-kingdom RNAi | Class teaching 3h+After class discussion and Quiz 1h |
13 | The application of RNA silencing in research, human health and crop production | Class teaching 3h+After class discussion and Quiz 1h |
14 | Long non-coding RNA, Circular RNA and RNA modifications | Class teaching 3h+After class discussion and Quiz 1h |
15 | Bioinformatics tools to study RNA silencing and Epigenetic | Class teaching 3h+After class discussion and Quiz 1h |
Total |
| 60 |
Textbook and any related course material:
C. David Allis, Marie-Laure Caparros, Thomas Jenuwein, Danny Reinberg (2015) Epigenetics,2nd Ed, CSHL press.
Narendra Tuteja, Sarvajeet Singh Gill (2013) Plant Acclimation to Environmental Stress, Springer.
Kenneth Alan Howard (2013) RNA Interference from Biology to Therapeutics (Advances in Delivery Science and Technology), Springer.
Tamas Dalmay (2017), Plant Gene Silencing: Mechanisms and Applications, CABI press.
Course title
Nanobiological Sensing and Detection
Instructor(s)-in-charge:
Prof. Lele Li
Course type:
Lecture
Course Assessment:
Homework: 7 assignments
Grading Policy:
Assignments 50%, Final 30%, Attendance 20%
Course Prerequisites:
College Chemistry, College Materials, English.
Catalog Description:
Biosensing and imaging using nanomaterials and nanotechnology has the potential to revolutionize scientific research and medical diagnostics. This course will focus on the principles, construction, and application of Nano-biosensing and imaging systems, and particularly the impact of nanotechnology on the development of biosensors. The course will be started with an introduction of the solid background on the nano-biological sensors, bioimaging, nanomaterials and nanotechnology, biorecognition units, biomarkers, and disease diagnostics. Then, examples of biosensing and imaging systems created from various nanomaterials are introduced, including fluorescent/luminescent nanoparticles, magnetic nanoparticles, carbon nanomaterials, gold nanoparticles, porous materials, and DNA nanostructures, with a distinct emphasis on the need to tailor nanosensor designs to specific biotargets. The topic of cancer-specific nano-biosensors will also be addressed and discussed to provide deep insight into the recent advances of using nano-biosensors for disease diagnostics and therapy.
Schedule of the course
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Textbook and any related course material:
No textbook, and electronic course reading materials will be provided one week before each class.
Course title
Nanotechnology for Solar Energy Utilization Applications
Instructor(s)-in-charge:
Prof. HE Tao
Course type:
Lecture
Course Assessment:
Four assignments: Exercise & Presentation
Grading Policy:
Typically 40% presentation, 40% exercise, 20% final
Course Prerequisites:
Materials physics, materials chemistry, solid state physics, semiconductor physics, physical chemistry, general chemistry
Catalog Description:
Because of concerns regarding energy security, environmental crisis, and the rising costs of fossil-fuel-based energy, there has been significant, resurgent interest in utilization of solar energy recently due to its clean nature and abundance of the source. Unfortunately, the utilization efficiency is still pretty low, which dramatically limits the wide use of solar energy. Nanotechnology may afford a solution to this. Thus, the major goal of this course is to provide the students general concepts and state-of-the-art developments in the field of nanotechnology for solar energy utilization. The course begins with a brief introduction of fundamentals of nanotechnology and solar energy. Then photon (light) management is discussed in detail, followed by a thorough description of conversion of light into electric energy (photovoltaics) and chemical energy (artificial photosynthesis). Detailed discussion of environmental remedy is covered too. Other applications such as thermoelectricity and thermochemistry are presented in the final session.
Schedule of the course
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Textbook and related documents:
No specific textbooks, though the following ones are listed. More reading materials will be provided during the lecture.
Nanostructured and photoelectrochemical systems for solar photon conversion, Edited by Mary D. Archer and Arthur J. Nozik, Imperial College Press, London, 2009
Nanostructured materials for solar energy conversion, Edited by Tetsuo Soga, Elsevier Science, 2007
Nanotechnology for Photovoltaics, Edited by Loucas Tsakalakos, CRC Press, Boca Raton, 2010
Course title
Nano Electronic Materials
Instructor(s)-in-charge:
Prof. XIE Liming
Course type:
Lecture
Course Assessment:
Homework: 10 assignments
Grading Policy:
Typically 20% attendance, 20% in-class performance, 40% homework, 20% final.
Course Prerequisites:
Solid state physics, physical chemistry
Catalog Description:
This course will first give a general review on nano electronic materials, including structure, synthesis and properties. And then introduce typical nano electronic materials in details. The typical nano electronic materials include quantum dots, nanowires, carbon nanotubes, graphene, two-dimensional materials beyond graphene.
Schedule of the course
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Textbook and any related course materials:
- Introduction to the Physics of Nanoelectronics, Edited by: S.G. Tan and M.B.A. Jalil, ISBN: 978-0-85709-511-4
- Fundamentals of Nanoelectronics, Edited by: George W. Hanson, ISBN-10: 0131957082
- Nanotechnology and Nanoelectronics: Materials, Devices, Measurement Techniques, Edited by: W. R. Fahrner, ISBN 3-540-22452-1
Expected level of proficiency from students entering the course:
Mathematics: strong
Physics: strong
Chemistry: strong
Course title
Plate Tectonics and Evolution of Tibetan Plateau
Instructor(s):
Prof. Lin Ding et al.
Course type:
Lecture
Course type:
Lecture
Catalog Description:
Plate tectonics is an integrated scientific theory that describes how the large-scale geologic structures on Earth are created as a result of Earth’s plates movements. In plate tectonics, the lithosphere — Earth's strong, rigid outermost shell—is broken into many tectonic plates, which lie on top of the weaker, ductile asthenosphere. Due to the convection of the asthenosphere, the plates move relative to each other and interact along their boundaries, where they converge, diverge, or slip past one another. These interactions generate many phenomena, such as mountain building, large continents, wide and deep oceans, volcanoes and earthquakes. To begin our explanation of the key elements of plate tectonics theory, we will first learn about the physical and chemical structures of the earth, types of plate boundaries, subduction zones and other special locations on plates. We will see how continents break up, how they collide, what makes plates move, and their relationships with petrology, paleomagnetism and geodynamics.
We will then introduce the application of plate tectonics on Himalayan-Tibetan Orogen. The India-Eurasia collision is the most significant geological event throughout the Phanerozoic and eventually created the youngest and most spectacular Himalaya-Tibetan Orogen on Earth. During the continental collision, Indian continental lithosphere began to subduct beneath Eurasian continent and further induced large-scale deformation, magmatism and metamorphism. More importantly, the continental collision induced rapid uplift of the Himalaya-Tibetan Plateau. The uplift of the large and high elevations (>5000m) of the Tibetan Plateau has not only affected regional geomorphology and geographical environments of Asia, but also impacted on regional or even global climate change. Therefore, the Himalayan-Tibetan orogen provides an ideal natural laboratory to investigate the mountain building process in general. It will cover the following topics:
Schedule of the course
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Course title
Physical Geography
Instructor(s):
Prof. XiaoMin Fang et al.
Course type:
Lecture
Catalog Description:
Physical Geography 2022 Spring semester is designed as an introduction course for research graduate students majored in the earth and environmental sciences. As a foundation in the study of geography, this course introduces the physical elements of the earth and the environment in which people live. The focus is on natural processes that create physical diversity on the earth, covering topics like weather and climate, vegetation and soils, landforms, ecosystems, their distribution and significance. This course is designed in an interactive way, combining basic theories and current research progress in several key fields. It enables the students to develop a broad understanding of geographic processes, and how human activity affects physical geography, especially in the Tibetan Plateau. The course is structured as a series of lectures with the topics listed as following:
Schedule of the course
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Course title
Global Change Ecology
Instructor(s)-in-charge:
Prof. WANG Tao et al.
Course type:
Lecture
Grading Policy:
The grading for this course will be based on:
- Participation (30% of grade)
- Report (70% of grade)
*Participation in lectures, discussions, and other activities is an essential part of the instructional process. Students are expected to attend class regularly. Those who are compelled to miss class should inform the instructor of the reasons for absences. Unexcused late assignments will have at a minimum 5 points deducted. To avoid this penalty you must contact the instructor prior to the due date. Each student should be expected to give a report at the end of the course.
Course Prerequisites:
This course does not have any pre-requisites.
Catalog Description:
This course is designed as an introductory course in ecology for graduate students majored in Earth Sciences. The class is intended to provide an introduction to main ecological processes, with particular attention to the responses of these processes to global change at local, regional, and global scales. It will also introduce the basic principles of local field measurement techniques, remote sensing, and land surface modeling in relation to carbon and nitrogen cycles. The course is structured as a series of lectures in which individual research cases are discussed with faculty tutors. It will cover the following topics:
Schedule of the course
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Course title
Climate Change
Instructor(s)-in-charge:
Prof. Dr.MA Yaoming
Course type:
Lecture
Catalog Description:
Climate Change 2022 spring semester is designed as an introductory course plus our research aspect in ITPCAS (Institute of Tibetan Plateau, Chinese Academy of Sciences) in the Climate Change for graduate students majored in Earth Sciences. This class is a synthesis of current knowledge of the climate system and past and present climates. It provides solid background information and includes critical assessments of issues that remain incompletely understood. There, it is up to the students to logically evaluate climate change issues presented daily by the media. This class will introduce related reference for climate researchers and students, especially for issues of climate change in Earth system. The class presents the basics surrounding climate change in a simple way while pointing out the complexity of climate data collection, processing, and interpretation. Our research aspect in ITPCAS will introduce climate change related topics, for example, land surface heat flux retrieves from in-situ data, satellite remote sensing data and numerical model; land surface model development and data assimilation; black carbon in the mountain glacier area; hydrological model and so on. All of these topics will enhance our theoretical questions about climate change, especially in the Tibetan Plateau.
The course is structured as a series of lectures and mini-seminars in which individual research cases are discussed with faculty tutors. It will cover the following topics:
Schedule of the course
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Course title
Chemical Reaction Engineering
Instructor(s)-in-charge:
Prof. Li Chunshan, Prof. Xu Baohua, Associate Prof. Li Minjie
Course type:
Lecture
Course Schedule:
4 hrs/week: 3 hrs. lecture by Instructors, 1 hr. Offline Reading Course.
Course Assessment:
Homework: 6 assignments, will be given after each class, extensive literature reading is expected.
Grading Policy:
Assignments 30%, Final 70%
Course Prerequisites:
College Chemistry, College Mathematics, English.
Catalog Description:
The course is mainly focusing on the essentials of kinetics, catalysis and chemical reactor engineering. The main issue of chemical reaction engineering is to analyze the physical chemistry of sub-processes in a reactor by a mathematical model method. Each process is expressed as an appropriate mathematical expression, thereby providing the analytical solution or numerical solution. Various typical reaction types and the proper reactor design theory will be introduced.
Schedule of the course 20´3
Section | Content | Hours |
| |
1 | Introduction of Chemical Reaction Engineering | Concept of chemical reaction engineering | 1 |
|
Chemical reaction engineering and safety | 2 |
| ||
Chemical reaction engineering application | 1 (Offline Course) |
| ||
2 | Homogeneous Reaction Kinetics | Concentration-Dependent term of a rate equation | 1 |
|
Temperature-Dependent term of a rate equation | 2 |
| ||
Searching for a mechanism | 1 (Offline Course) |
| ||
Predictability of reaction rate from theory | 2 |
| ||
3 | The Kinetics of Gas-Solid Phase Catalysis | Introduction to catalysis | 0.5 |
|
Comparison between homogeneous and heterogeneous catalysis | 0.5 |
| ||
Catalysts composition | 1 (Offline Course) |
| ||
Catalyst deactivation and regeneration | 1 |
| ||
Steps in gas-solids catalysis | 2 |
| ||
Adsorption at the gas-solids interface | 1.5 |
| ||
Adsorption modes | 1.5 |
| ||
Process for establishing kinetic models | 2 (Offline Course) |
| ||
4 | Macro-Kinetics of Gas-Solid Phase Catalysis | Transport and reaction at phase boundaries | 1 |
|
The diffusion of gas in solid particles | 1 |
| ||
The distribution of gas concentration and temperature in solid particles. | 1 |
| ||
The correlation of the macroscopic reaction rate | 1 (Offline Course) |
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5 | Autoclave Type and Homogeneous Tubular Reactor | Types of ideal reactors | 1.5 |
|
Autoclave type reactor | 1.5 |
| ||
Homogeneous tubular reactor | 1 (Offline Course) |
| ||
6 | Gas-Solid Phase Catalytic Reaction Fixed Bed Reactor | Main types of fixed bed catalytic reactor | 1.5 |
|
Physical parameters of fixed bed reactor | 1.5 |
| ||
Mass transfer and heat transfer in fixed bed reactor | 1 (Offline Course) |
| ||
7 | Gas-Solid Phase Catalytic Reaction Fluidized Bed Reactor | Concept of fluidized bed reactor | 1 |
|
Fluidization phenomenon | 2 |
| ||
Geldart classification of solids | 1 (Offline Course) |
| ||
8 | Gas-Liquid Reaction and Bubbling Reactor | Theory sketch | 2 |
|
Mass transfer with irreversible and reversible reactions | 2 |
| ||
9 | The Gas-Liquid Reaction Process and the Reactor | Mass transfer theories | 2 |
|
Key multiphase reactors | 2 (Offline Course) |
| ||
10 | Liquid-Solid Reaction and Fluid Bed Reactor | liquid-solid reaction process | 3 |
|
Application of fluidized bed reactor | 1 (Offline Course) |
| ||
11 | Gas-Liquid-Solid Reaction Engineering | Types of gas-liquid-solid Reactors | 2 |
|
Macroscopic reaction kinetics | 2 |
| ||
Application examples | 2 |
| ||
Discussion and prospect | 2 (Offline Course) |
| ||
12 | Safety of chemical reaction process and Design of reactor | General rules of safety | 1 |
|
Examples of chemical reaction process safety | 2 |
| ||
Reactor design | 1 (Offline Course) |
|
Textbook and any related course material:
1. Reaction Engineering, 李绍芬,2019.01,化学工业出版社
2. Multi-Phase Chemical Reaction Engineering and Technology,金涌,2006.05,清华大学出版社
3. Chemical Reaction Engineering, Octave Levenspiel, 1998.08, Wiley.
4. Concepts of Modern Catalysis and Kinetics, Ib Chorkendorff, Hans Niemantsverdriet, 2003.10, Wiley.
5. Fundamentals of chemical reaction engineering, Mark Davis and Robert Davis, 2003, McGraw-Hill (MHP)
Course title
Energy Chemistry and Energy Chemical Industry
Instructor(s)-in-charge:
Prof. Li, Songgeng, Associate prof, Fan, Chuigang
Course type:
Lecture
Course Assessment:
Homework: 10 assignments
Grading Policy:
Assignments 40%, Final 40%, Attendance 20%
Course Prerequisites:
Familiar with the basic knowledge of Chemistry, Thermodynamics, and Flow and Transport Process.
Catalog Description:
This course covers the fundamentals of energy conversion in thermomechanical, thermochemical, electrochemical, and photoelectric processes with emphasis on efficiency, environmental impact and performance. The topics include coal utilization, petro chemistry, bio-energy, fuel cell, battery and some new energy resources like hydrogen, solar, etc. Systems utilizing fossil fuels, renewable resources and hydrogen over a range of sizes and scales are discussed. Different forms of energy storage and transmission are also involved in this course. It is expected that after taking this course, students will be familiar with basic chemistry principles on energy processing, and most common energy processing technologies together with some environmental issues related.
Schedule of the course
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Textbook and any related course material:
Ripudaman Malhotra, Fossil Energy, Springer, 2013,
Handbook of Alternative Fuel Technologies, CRC Taylor & Francis, 2015
Giafranco Pistoia, Battery Operated Devices and Systems,Elsevier, 2009
Course title
Green Chemistry and Engineering
Instructor(s)-in-charge:
Prof. Zhang, Guangjin,
Course type:
Lecture
Course Assessment:
Homework: 14 assignments, presentations
Grading Policy:
Assignments literature report 40%, Final Report 40%, Attendance 20%
Course Prerequisites:
Familiar with the basic knowledge of Chemistry, Thermodynamics.
Catalog Description:
The purpose of this course includes: Increase the interest to Chemistry and Chemical Engineering, extend scope of knowledge, make the idea of “Green” into mind. Knowing the basic knowledge of green chemistry and engineering, the definition, developments, theory and some examples; Getting the ideas on how to develop a green process and can applied the learned knowledge in your further research works. The topics include basic principles of green chemistry, task of green chemistry, Catalysis and Green Chemistry. Biocatalysis, Photo/electrical Catalysis, Solid catalyst, Acid and base, Ionic liquid and other non-organic solvents, Chemical separation, Alternate Energy sources, New synthetic route, Functional materials, Design of safe and harmless chemicals.
Schedule of the course
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Textbook and any related course material:
Mukesh Doble, Green Chemistry and Processes,elsevier, 2009,
Albert Matlack, Introduction to Green Chemistry, CRC Press, 2012
Course title
Fluidization and Multiphase Flow
Instructor(s)-in-charge:
Prof. WANG Wei
Course type:
Lecture
Course Assessment:
Homework: 2 home exercises are to be solved individually. 2 course assignments are to be solved in groups of 2-3 students and extensive literature reading is expected.
Grading Policy:
Assignments 40%, Final 40%, Attendance 20%
Course Prerequisites:
Principle of Chemical Engineering
Catalog Description:
This course will provide comprehensive knowledge of fluidization and multiphase flow with fundamentals and applications related to chemical engineering and energy conversion. A student who has met the objectives of the course will be able to:
- Understand the flow regime of gas-solid flow and state of the art of research and application
- Manage basic calculations and solve practical problems related to fluidization
- Overview the modeling approached
- Design a fluidized bed reactor with preliminary requirement
Schedule of the course
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Textbook and any related course material:
The textbook mainly refers to:
Kunii, D., Levenspiel, O. Fluidization Engineering. Butterworth-Heinemann.1991.
Electronic course reading materials will be provided before each class. The following references are recommended, including:
Grace, J. et al. Fluidized Beds. Multiphase Flow Handbook. Taylor & Francis. 2006.
Gidaspow, D. Multiphase Flow and Fluidization, Academic Press, 1994.
Course title
Applied Statistics
Instructor(s)-in-charge:
Assoc. Prof. Qian WANG Email: wangqian@ucas.ac.cn
Course type:
Lecture
Grading Policy:
Participation+in-class quiz (30%), Homework (40%), Project (30%)
Catalog Description:
This course is an introduction to applied statistics and data analysis. Topics are chosen from descriptive measures, sampling and sampling distribution, estimation and confidence interval, hypothesis test, linear regression, ANOVA, goodness-of-fit and contingency analysis. Data analysis is difficult without some computing tools and the course will introduce some statistical computing with Excel.
Schedule of the course
Section | Contents |
| What is statistics? |
Process of statistical study | |
Key definitions | |
Data types | |
| Data sources: Primary/Secondary |
Survey/Observation/Experiment | |
Issues in data collection | |
Sampling techniques: Probability/Nonprobability | |
Sampling errors | |
| Graphical presentation of data: Categorical/Numerical |
Measures of data: Center/Variation/Shape | |
Covariance & correlation coefficient | |
| Introduction of statistical inference |
Sampling distribution | |
Point estimation | |
Confidence intervals: one population/two populations | |
Determine sample size | |
| Introduction |
Null Hypothesis and Alternative Hypothesis | |
Type I Error and Type II Error | |
Test on one populations | |
Test on two populations | |
| Relationships between variables and regression |
Simple linear regression | |
Residual analysis | |
Multiple linear regression: Collinearity | |
Model building: Nonlinear/Categorical variables/Variable selection | |
Common Mistakes in Regression | |
Logistic regression | |
| Chi-square test of proportion for Multinomial Experiment |
Chi-square test of independence | |
Chi-square test of distribution | |
| Introduction |
One-way ANOVA | |
Randomized Blocks ANOVA | |
Two-way ANOVA |
Textbook and any related course material:
- Ajit C. Tamhane and Dorothy D. Dunlop. Statistics and Data Analysis: From Elementary to Intermediate. Prentice Hall, 2000.
- Pawel Lewicki and Thomas Hill. Statistics: Methods and Applications. Springer, 2006.
- Roxy Peck. Statistics: Learning from Data. Cengage Learning, 2017.
Course title
Applications of Remote Sensing on Climate Change, Land Science and Severe Weather
Instructor(s)-in-charge:
Prof. QI Youcun & Associate Prof. CAO Jie & Prof. DONG Jinwei
Course type:
Lecture
Course Schedule:
8hrs/week by instructor.
Course Assessment:
Homework: 4 assignments
Grading Policy:
Typically 20% Attendance, 40% homework, 20% Oral Presentation, 20% final.
Course Prerequisites:
Remote Sensing, Climate Change, Land Science
Catalog Description:
This course introduces the fundamentals, commonly used methods, and applications of remote sensing, and emphasizes the use of remote sensing data for studying climate change, land use change and severe weather forecasting. Climate change and land use change are the most important components of global change studies. This course would provide a comprehensive examination of land use change in the context of global environmental change, together with a practical guide for interpreting satellite imagery in severe weather situations. We will first learn the basics of remote sensing and fundamentals essential for understanding severe weather following by the remote sensing data analyses methods. Then these knowledge and tools will be used to understand the climate and land use changes as well as to improve severe weather forecasting at regional, national, and global scales. We will better understand the global change issues by examining socioeconomic drivers and physical and biological impacts of land use change and climate change.
Schedule of the course
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Contents of the course
Section 1: Basic of Remote Sensing
- Electromagnetic Radiation Principles
- Elements of Visual Image Interpretation
- Multispectral Remote Sensing Systems
- Hyperspectral Remote Sensing Systems
- Thermal Remote Sensing Systems
- Active and Passive Microwave Remote Sensing
- Basic of Remote Sensing for climate change
- Major Sensors for monitoring climate change
- Basic of Remote Sensing for land use change
- Major Sensors for monitoring land use change
- Fundamentals in Satellite imagery
- Basic of satellite imagery in analyzing and predicting severe weather
Section 2: Methods of data processing and analyses
- Methods of data processing and analyses
- Data processing
- Data visualization
- Land classification methods
- Machine learning, etc.
- Interpreting satellite water vapor imagery
- Severe weather analyses
Section 3: Remote Sensing of Climate Change
- Generating the remote sensing data
- Existing climate data and the applications
- Data collection (Satellite, GPM, DPR)
- Accuracy Assessment
- Rainfall types and changes
- Snow coverage and depth monitoring
Section 4: Remote Sensing of Land Use Change
- Existing land use maps and the applications
- Field Data Collection (Google Earth, Field Photos, and Visual Interpretation of images)
- Land use mapping and change detection
- Accuracy Assessment
- Agricultural land use change
- Forest changes monitoring
Section 5: Remote Sensing of Severe Weather
- Interpretation of light and dark imagery features in satellite water vapor imagery
- Potential vorticity thinking in severe weather
- Operational use of the relationship between potential vorticity fields and water vapor imagery
- Water vapor imagery analysis of main ingredients of severe weather situations
- Use of water vapor imagery for assessing numerical climate prediction model behavior and improving forecasts
Textbook and any related course material:
1, John R. Jenson, 2007, Remote Sensing of the Environment: An Earth Resource Perspective
2, Christo G. Georgiev, Patrick Santurette, and Karine Maynard, 2016, Weather Analysis and Forecasting: Applying Satellite Water Vapor Imagery and Potential Vorticity Analysis, Second Edition
3, Five journal papers will be assigned for student’s individual research project.
Students can find these papers from the list we provide or through the Web of Science.
Expected level of proficiency from students entering the course:
Prior to taking this course, students need to have basic GIS and imagery process skills, the final project will require quantitative problem solving skills and might entail working with small datasets.
Course title
Water Chemistry
Instructor(s)-in-charge:
Asso. Prof. Huiyu DONG, Prof. Chao LIU, & Asso. Prof. Mengkai LI
Course type:
Lecture
Course Schedule:
6hrs/week by instructor
Course Assessment:
Homework: 5 assignments
Grading Policy:
Typically 25% homework, 25% presentation, 50% final.
Course Prerequisites:
General Chemistry, Physical Chemistry
Catalog Description:
Water Chemistry is a core course in the Environmental Science and Engineering program. It provides a thorough understanding of the fundamentals of water chemistry to our incoming cohorts of students. This course details the quantitative treatment of chemical processes in aquatic systems such as lakes, oceans, rivers, estuaries, groundwaters, and wastewaters. It includes a brief review of chemical thermodynamics that is followed by discussion of acid-base, precipitation-dissolution, coordination, and reduction-oxidation reactions. Emphasis is on equilibrium calculations as a tool for understanding the variables that govern the chemical composition of aquatic systems and the fate of inorganic pollutants.
Schedule of the course
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Contents of the course
Part 1: Review of Thermodynamics, and Setting Up and Solving Equilibrium Problems
- Introduction, Review of Laws of Thermodynamics
- Gibbs Free Energy, Chemical Potential, eq. Constants
- Setting Up Equilibrium Problems - Tableau Method Molecular beam epitaxy
- Solving Problems by Approximation - Log C vs. pH Diagrams
- Temperature, Pressure, and Ionic Strength Effects on Equilibrium
- Properties of Water, Interactions Among Solutes, Activity Coefficients
- Activity Coefficients and Debye-Huckel Theory
Part 2: Acid-base Chemistry of Natural Waters
- The Carbonate System and Alkalinity
- Uses and Limitations of Alkalinity
- Buffer Capacity
Part 3: Dissolution, Precipitation, and Complexation
- Mineral Solubility
- Stability Diagrams
- Chemical Weathering and Natural Water Composition
- Trace Metals - Inorganic Complexation
Part 4: Redox Chemistry
- Equilibrium Calculations with Redox Reactions
- Redox Potential (pe) as a System Variable
- pe-pH Diagrams
- Trace Metals - Organic Complexation
- Effects of Complexation and Precipitation on Redox Equilibria
Part 5: Chemical Kinetics
- Oxidation Kinetics in Homogeneous Systems
- Heterogeneous Systems
- Enzyme Catalysis
- Photochemical Process
Textbook and any related course material:
Mark Benjamin, Water Chemistry, Second Edition
Stumm, Werner, and James J. Morgan. Aquatic Chemistry. New York, NY: Wiley-Interscience, 1996. ISBN: 0471511854.
Anderson, G. W. Thermodyanmics of Natural Systems. New York, NY: Wiley-Interscience, 2005. ISBN: 0521847729.
Expected level of proficiency from students entering the course:
Mathematics: strong
Chemistry: strong
Course title
Fundamental for Internet of Things and Its Applications
Instructor(s)-in-charge:
Prof. Weidong Yi
Course type:
Lecture
Course Schedule:
3hrs/week by instructor. 1 hr/week by teaching assistant.
Course Assessment:
Homework: 6 assignments
Grading Policy:
Typically 30% homework, 40% final exam, 30% final project
Course Prerequisites:
None
Catalog Description:
This course provides an introduction to the fundamental concepts and principles of internet of things (IoT)and a survey of its applications at different areas. The course is broken into four parts. In Part One, Introduction, which provides an overview of IoT applications, sensor nodes, and basic system structure,different node architectures and discusses in detail the sensing and processing subsystems as well as communication interfaces. Part Two, Basic Architectural Framework, which provides a detailed discussion of protocols and algorithms used at different network protocol layers in sensor systems. Part Three, Node and Network Management, which discusses several additional techniques and presents solutions for a variety of challenges, including power management techniques, concept of time synchronization and an overview of several synchronization strategies, a variety of localization strategies and compares their trade-offs. Security challenges and defenses against attacks on sensor networks of IoT are discussed in the part. Part Four, Applications, which provides cases study for applications in IoT, including applications for environmental monitoring , structure health monitoring, traffic control, precision agriculture, smart city , smart health-care etc.
Schedule of the course
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Contents of the course
- Motivation for an Internet of Things
- Definitions and Background
- Challenges and Constrains
- Node Architecture of IoT
- The Sensing Subsystem
- The Processor Subsystem
- Communication Interfaces
- Prototypes
- Operating System for IoT
- Functional Aspects
- Nonfunctional Aspects
- Prototypes
- Physical Layer
- Basic Components
- Source Encoding
- Channel Encoding
- Modulation
- Medium Access Control
- Wireless MAC protocols
- Characteristics of MAC Protocols in Sensor Network of IoT
- Contention-Free MAC Protocols
- Contention-Based MAC Protocols
- Hybrid MAC Protocols
- Network Layer
- Routing Metrics
- Flooding and Gossiping
- Data-Centric Routing
- On-Demand Routing
- Power Management
- Local Power Management Aspects
- Dynamic Power Management
- Conceptual Architecture
- Time Synchronization
- Basic of Time Synchronization
- Time Synchronization Protocols
- Localization
- Ranging techniques
- Range-Based Localization
- Rang-Free Localization
- Event-Driven Localization
- Security
- Fundamentals of Networks Security
- Security Attacks in IoT
- Protocols and Mechanisms for Security
- Applications
Textbook and any related course material:
- Waltenegus Dargie and Christian Poellabauer, Fundamentals of Wireless Sensor Networks, 2010, John Wiley& Sons Ltd
- Course Reader (Selected Reference Papers)
Expected level of proficiency from students entering the course:
None
Course title:
Biodiversity science
Instructor(s)-in-charge:
Prof. MA Keping
Course type:
Lecture
Course Schedule:
4hrs/week by instructor
Course Assessment:
Homework: 10 assignments
Grading Policy:
Typically 40% homework, 60% final.
Course Prerequisites:
Ecology, General biology, Biogeography
Catalog Description:
This course includes 14 sections:
- Introduction
- history of biodiversity science, conservation ecology and conservation biology
- hot topics for biodiversity science
- Biodiversity status and conservation strategies
- Biodiversity distribution pattern and associated environmental factors
- Species distribution model and its applications
- Biodiversity maintenance mechanisms
- Biodiversity and ecosystem function and services
- Biodiversity monitoring and community assembly
- Biodiversity informatics and big data science
- Indicators and surrogates for biodiversity
- Climate and biodiversity
- Biodiversity mapping and conservation priority areas
- Biodiversity hotspots and conservation planning
- On site and off site conservation
- Global efforts in biodiversity conservation
Schedule of the course
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Contents of the course
1 Introduction
- History of biodiversity science, conservation ecology and conservation biology
- Hot topics for biodiversity science
- Global significance of biodiversity research in China
- Introduction of journals related to biodiversity science
2 Biodiversity status and conservation strategies
- What is biodiversity
- Status of biodiversity
- Vegetation geographical distribution
- Endemism of biodiversity
- Threats to biodiversity
- Assessment of threatened status of biodiversity
- Conservation progress
3 Biodiversity distribution pattern and associated environmental factors
- Brief history and current knowledge about geographical patterns in biodiversity
- Ecological hypotheses explaining biodiversity patterns
- Evolutionary hypotheses explaining biodiversity patterns
- Stochastic processes on biodiversity patterns
- Effects of spatial scales on biodiversity patterns
- Exercise: the estimation of biodiversity patterns
4 Species distribution models and its applications
- Determinants of species distributions
- How species distribution models work?
- Validation of species distribution models
- Assumptions of species distribution models
- Uncertainties in the calibration of species distribution models
- Application of species distribution models
5 Biodiversity maintenance mechanisms
- Deterministic processes, including competitive exclusion, environmental filtering, Janzen-Connell hypothesis, and species pool hypothesis
- Stochastic processes, including neutral theory, dispersal limitation
- Methods for the test of different hypotheses
- Exercise: Using null models to test the mechanisms of species assembly
6 Biodiversity and ecosystem function and services
- Brief history of the topic
- Major concepts in studies on biodiversity and ecosystem function and services
- Relationships between biodiversity and ecosystem function and services
- Mechanisms of biodiversity effects
- Methods for the testing of biodiversity effects
- Major biodiversity experiments
7 Biodiversity monitoring and community assembly
- Brief history of the topic
- Major initiatives for biodiversity monitoring
- Biodiversity monitoring in China
- Species coexistence and Community assembly rules
8. Biodiversity informatics and big data science
- Brief history of the topic
- Major initiatives for biodiversity informatics
- Biodiversity informatics in China
- Big biodiversity data resources
- Mapping data based research
9. Indicators and surrogates for biodiversity
- Surrogates, umbrellas and keystones
- Indicators for biodiversity loss
- Tradeoffs between different priorities and species
- Holistic indicators of biodiversity
10. Climate and biodiversity
- Species ecophysiology and environment
- Migratory species and changing needs
- Climate change-what does it mean on a species level
- Phenology, asynchrony, mis-matches and novel communities
- Microclimate and different forms of adaptation
11. Biodiversity mapping and conservation priority areas
- Metrics in biodiversity
- Scale and types of resolution in biodiversity and what they mean
- Rarity, threat, choosing units for biodiversity analysis and the implications
- Mapping biodiversity threats
- Understanding biodiversity data, assumptions of analysis, types of data
- Biodiversity models, types and applications
- Homework: Redlist of ecosystems assessment
12. Biodiversity hotspots and conservation planning
- Asking questions with biodiversity data
- Understanding assumptions in biodiversity analyses
- Mapping hotspots
- Tradeoffs in prioritization approaches
- Approaches for developing priorities
- Landscape scale conservation planning and tools available
- Homework: Continue and finish redlisting ecosystem
13. On site and off site conservation
- Discussion of redlist of ecosystems, how do priorities compare, is the data there
- Species vs ecosystem approaches to conservation
- Translocation, breeding
- Weighing approaches and case-studies in different approaches to conservation and their uses: how to balance priorities and costs
- Homework: Each student will be assigned a species to develop conservation plans for under different circumstances
14. Global efforts in biodiversity conservation
- Discuss case-studies, include real examples of where these approaches have been used, explore tradeoffs between different approaches, discuss success
- Conservation at different scales
- Conservation targets
- International bodies and conservation, CBD and other multilateral agreements
Textbook and any related course material:
Navjot S. Sodhi and Paul R. Ehrlich. 2010. Conservation Biology for All. Oxford University Press;
Richard J. Ladle and Robert J. Whittaker. 2011.Conservation Biogeography. Wiley-Blackwell
Richard Primack. 2014. Essentials of Conservation Biology. Sinauer Associates
Mark V. Lomolino, Brett R. Riddle, Robert J. Whittaker, James H. Brown. 2010. Biogeography. Oxford University Press
Fred Van Dyke. 2020. Conservation Biology: Foundations, Concepts, Applications. Springer
Expected level of proficiency from students entering the course:
General biology: moderate
Ecology: moderate
Biogeography: moderate
Course title
Development Geography
Instructor(s)-in-charge:
Prof. DENG Xiangzheng & Prof. DONG Jinwei & Associate Prof. SONG Wei & Associate Prof. WU Feng
Course type:
Lecture
Course Schedule:
3hrs/week by instructor
Course Assessment:
Homework: 4 assignments;student presentation
Grading Policy:
Typically 30% homework, 30% student presentation, 40% final.
Course Prerequisites:
NULL
Catalog Description:
Development geography is a subdiscipline of geography that studies human development and quality of life. Based on geography, development geography integrates disciplines such as management, economics, ecology, etc., and has the characteristics of integrity and interdisciplinary. Development Geography facilitates a more integrated understanding of development and places development problems within the context of the global economy and society. Its topics cover the concepts, theories and approaches, and development trend etc., which ranges from population and culture to agricultural and industrial development. Specifically, the contents of the courses include the concepts and progress of development geography, overview of geographical development differences; and specific analysis of geographical distribution and differences in income inequality and poverty, population, education and health, culture, resource and environment carrying capacity, rural and agricultural development, urban and industrial development, and the regional differences of globalization and international and regional development, etc. Further, case studies will be presented to highlight the possible solutions, as well as the problems, at local, national and international levels.
Schedule of the course
|
Contents of the course
Section 1: Understanding Development Geography
- Concepts and progress of development geography
- Concepts, discipline classification and development of geography
- Overview of geographical research and development
- Concepts relating to geography
- Tools applied in geography
- Overview of development geography
- Concepts and research objects of development geography
- Role of development geography in geography
- Theories in development geography
- Theoretical and practical significance of development geography
- Research prospects in development geography
- Overview of geographical differences in regional development geography
- Indicators for geographic regional development differences measure
- Geographic regional development differences in China
- Development differences between developing and developed countries
- Reasons for regional development difference and the theoretical origins
Section 2: Social and Economic Development
- Income inequality and poverty
- Fundamentals of income inequality and poverty
- Measurement and representation of income inequality
- Measurement and representation of poverty
- Policies to address income inequality and poverty
- Geographical distribution of population in China
- Characteristics of population growth
- Characteristics of population structure
- Spatial and geographical distribution of population
- Population growth and migration policy
- Land use policy and management in China
- Evolution of land use policies in China
- Effectiveness and impacts of major land use policies in China
- Discussion on land system reform
- Agriculture and food security in China
- Role of agriculture and food security
- Spatial distribution of agricultural production and regional difference
- Reform of agricultural policies
Section 3: Environmental and Rural-Urban Development
- Resource and environmental carrying capacity and regional differences
- The effect of environmental protection and ecological civilization construction on geographical development
- Measurement and characterization of environmental capacity and resources and environmental carrying capacity
- Measurement and characterization of ecological development efficiency
- Research on the convergence of regional economic development
- Ecological civilization construction and sustainable development strategic spatial layout
- Transformation path and policy choices in underdeveloped areas
- Geographic development differences in rural areas and agriculture
- The role of cities and industry in geographic development
- Urbanization process and spatial distribution differences
- Industrial development status and spatial distribution differences
- Urbanization development and industrial reform policies
- Geographic development differences in cities and industry
- The role of cities and industry in geographic development
- Urbanization process and spatial distribution differences
- Industrial development status and spatial distribution differences
- Urbanization development and industrial reform policies
Section 4: Globalization, trade and regional development
- Review on globalization and regionalization development
- Role of globalization on geography development
- Current international geographical differences
- Status of China in the globalization process
- Policy choice of developing countries in the process of globalization
- International trade, cooperation and regional development
- Theory of international trade for the development of the geographical environment
- International cooperation organizations and institutions
- Geopolitics and protectionism
- Trade policy comparison between countries
- The balance of payments, financial stability and regional development
- International financial stability for the role of regional development
- Balance of payments deficit and trade war
- Effects of the global financial crisis on developing countries
- Financial system reform and promoting the development of regional policy
- The national cases: China, Brazil and India
- National development in the future
- China's development present situation and the future
- Brazil's development present situation and the future
- India's development present situation and the future
Textbook and any related course material:
Hodder, R. (2000). Development Geography. Psychology Press.
Potter, R., Conway, D., Evans, R., & Lloyd-Evans, S. (2012). Key Concepts in Development Geography. Sage Publications.
Lawson, V. (2014). Making Development Geography. Routledge.
Expected level of proficiency from students entering the course:
Geography: Medium
Economics: Primary
Course title
Integrative Systematic Biology
Instructor(s)-in-charge:
Prof. ZHU Chao-Dong, Dr. LUO A-Rong, Dr. Douglas CHESTERS
Course type:
Lecture
Course Schedule:
4hrs/week by instructor.
Course Assessment:
Homework: 12 assignments
Grading Policy:
Typically 40% homework, 40% each midterm, 20% final.
Course Prerequisites:
Basic knowledge in general biology and molecular biology.
Catalog Description:
This course offers an introduction to Integrative Systematic Biology, generally including four sections. The first section covers topics aiming at the foundation of systematic biology – species classification, such as traditional morphological taxonomy, morphometrics, graphic analysis, and molecular species delimitation. The second section then targets the systematics of classified species via both molecular sequences and morphological characters. With this section, students will be knowledgeable of molecular models accounting for molecular evolution, advances in phylogenomic research, methods for estimating evolutionary timescales of the Tree of Life, and so on. The third section focuses on advanced topics including ancestral trait reconstruction, species diversify and diversification rates, co-evolution between species groups, evolutionary hypotheses, and so on. The fourth section provides demos which would teach students important techniques in this field, such as R programming, statistics analyses, and tree reconstruction.
Schedule of the course
Section | Content | hours |
| Content |
1 | Systematics Foundations | 3 | 1 | Evolutionary Biology |
2 | Tree of Life | |||
3 | Classification and Phylogeny | |||
4 | Biodiversity Macroevolution | |||
2 | Molecular Systematics | 3 | 1 | Species Delimitation |
2 | Species Interactions | |||
3 | Molecular Phylogenetics and Phylogenomics | 3 | 1 | Phylogenetics Trees |
2 | Tree Thinking | |||
3 | Molecular Phylogenetics | |||
4 | Phylogenetic Data | |||
5 | Phylogenetic Methods | |||
6 | Phylogenomics | |||
7 | Gene Tree and Species Tree | |||
4 | Species Theories and Molecular Species Delimitation | 3 | 1 | Available Species Concepts |
2 | Hypotheses of Speciation | |||
3 | Controversies of 'species' | |||
4 | Recent developments of the species concept | |||
5 | Molecular Species Delimitation and Case Studies | |||
5 | Student Presentation | 3 | 1 | Student Presentation |
6 | Molecular Ecology Background | 3 | 1 | Molecular Markers |
2 | DNA Taxonomy and DNA Barcoding | |||
3 | Metabarcoding | |||
4 | Genetics in Biogeography | |||
7 | Applied DNA Barcoding | 3 | 1 | Phylogenetics for Molecular Ecology |
2 | Integrating Omics with DNA Barcodes | |||
3 | Multi-Faceted Molecular Profiling | |||
8 | Phylogeography and Conservation | 3 | 1 | Case Studies |
9 | Student Presentation | 3 | 1 | Student Presentation |
10 | Classification and the Tree of Life | 3 | 1 | Macroevolution Basics |
2 | Plant Evolution | |||
3 | Animal Evolution | |||
4 | Human Evolution | |||
11 | Molecular Clock and Estimating Evolutionary Timescales | 3 | 1 | Bayesian Phylogenetic Analysis |
2 | Markov Chain Monte Carlo Sampling | |||
3 | The Molecular Evolutionary Clock | |||
4 | Estimating Evolutionary Timescales | |||
5 | Framework of Bayesian Molecular Clock Dating | |||
6 | Molecular Clock Dating with BEAST 2 | |||
12 | Q&A or Lab Tour | 3 | 1 | Q&A or Lab Tour |
13 | Final Examination | 4 | 1 | Final Examination |
Textbook and any related course material:
The Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing, edited by Philippe Lemey, Marco Salemi, and Anne-Mieke Vandamme, 2009, Cambridge University Press;
Phylogenetics in the Genomic Era, edited by Celine Scornavacca, Frédéric Delsuc, Nicolas Galtier, 2020, No commercial publisher, Authors open access book, hal-02535070.
The Molecular Evolutionary Clock: Theory and Practice, edited by Simon YW Ho, 2020, Springer.
Expected level of proficiency from students entering the course:
Biology: strong
Mathematics: competent
Course title
Academic Communication for International Conferences Instructor(s)-in-charge:
Course type:
Lecture
Grading Policy:
1. 40% given to the final group presentations
2. 60% given to the attendance, assignments and group reports
Schedule of the course
- Lecture 1: Course Introduction
- Lecture 2: Interview for academic purposes--1
- Lecture 3: Interview for academic purposes--2
- Lecture 4: Discussion with examples
- Lecture 5: Discussion with comparison and contrast
- Lecture 6: Discussion with cause-effect
- Lecture 7: Presentation—introduction and overview
- Lecture 8: Presentation—reporting your research
- Lecture 9: Making posters
- Lecture 10: Presenting more effectively
- Lecture 11: Final Group Presentations